SNP Analysis

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1. References

1. Wikipedia : http://www.wikipedia.org

2. Tools identifing each person

1. SNP

1. What is SNP.

2. Unfamiliar concept

1. Psedo-autosomal region

2. Minor allele frequency

3. Hardy-Weinberg Equilibrium

3. How to make SNP data.

1. Affymatrix

2. Illumina

4. Input arguments for SNP data analization.

1. Pedigree

2. Phenotype

3. Position of SNP base pair

4. Relationship between SNP base pair

5. How to analyze SNP data.

6. Analization tool for SNP data.

1. PLINK

7. Output from SNP data.

8.  Meaningful Result.

1.  What and how SNP base pair set is related to specific phenotype.

9. Imagination

1. proteins on phenotype-associated pathways -- potent SNP base pair set -- one of genomic clues for the phenotype

 2. CNV

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